Bloch_McConnell_CV_Model Class Reference

Numerical solving of Bloch equations As an application of the CVODE solver by Lawrence Livermore National Laboratory - Livermore, CA http://www.llnl.gov/CASC/sundials. More...

#include <Bloch_McConnell_CV_Model.h>

Inheritance diagram for Bloch_McConnell_CV_Model:

Collaboration diagram for Bloch_McConnell_CV_Model:

Public Member Functions
virtual	~Bloch_McConnell_CV_Model ()
	Default destructor.
	Bloch_McConnell_CV_Model ()
	Constructor.
Public Member Functions inherited from Model
	Model ()
	Constructor.
virtual	~Model ()
	Default Destructor.
void	Prepare (CoilArray *pRxCoilArray, CoilArray *pTxCoilArray, ConcatSequence *pConcatSequence, Sample *pSample)
	Prepare for simulations.
void	SetSequence (ConcatSequence *pConcatSequence)
	Set MR sequence.
void	Solve ()
	Solve differential equations.
void	SetDumpProgress (bool val)

Protected Member Functions
virtual void	InitSolver ()
	Initialize solver.
virtual void	FreeSolver ()
	Free solver.
void	PrintFinalStats ()
	Summery output.
virtual bool	Calculate (double next_tStop)
Protected Member Functions inherited from Model
void	RunSequenceTree (double &dTimeShift, long &lIndexShift, Module *module)

Private Attributes
void *	m_cvode_mem
double	m_tpoint
double	m_reltol
int	m_nprops
int	m_ncomp
BMAux	m_bmaux

Additional Inherited Members
Static Public Member Functions inherited from Model
static void	saveEvolution (long index, bool close_files)
	Save time evolution to disk.
Protected Attributes inherited from Model
World *	m_world
	Simulation world
CoilArray *	m_rx_coil_array
	Receive coil array
CoilArray *	m_tx_coil_array
	Transmit coil array
ConcatSequence *	m_concat_sequence
	Top node of the sequence tree for simulation.
Sample *	m_sample
	Sample
double	m_accuracy_factor
	increase accuracy by this factor in case of numerical problems
bool	m_do_dump_progress
	If true, percentage progress during Solve() is written to .jemris_progress.out.

Detailed Description

Numerical solving of Bloch equations As an application of the CVODE solver by Lawrence Livermore National Laboratory - Livermore, CA http://www.llnl.gov/CASC/sundials.

MR model solver using CVODE

Member Function Documentation

Calculate()

bool Bloch_McConnell_CV_Model::Calculate ( double next_tStop )

protectedvirtual

see Model::Calculate()

Implements Model.

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FreeSolver()

void Bloch_McConnell_CV_Model::FreeSolver ( )

protectedvirtual

Free solver.

Release the N_Vector

Implements Model.

InitSolver()

void Bloch_McConnell_CV_Model::InitSolver ( )

protectedvirtual

Initialize solver.

Initialize N_Vector and attach it to my world

Implements Model.

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PrintFinalStats()

void Bloch_McConnell_CV_Model::PrintFinalStats ( )

protected

Summery output.

More elaborate description here please

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The documentation for this class was generated from the following files:

• /Users/stoeckert/DZNE/workspace/jemris/src/Bloch_McConnell_CV_Model.h
• /Users/stoeckert/DZNE/workspace/jemris/src/Bloch_McConnell_CV_Model.cpp